Category Archives: HPC

LSF Job Dependencies

from: http://www.ccs.miami.edu/hpc/lsf/7.0.6/admin/jobdependencies.html#wp26312 Job Dependencies Contents Job Dependency Terminology Job Dependency Scheduling Dependency Conditions View Job Dependencies Job Dependency Terminology Job dependency: The start of a job depends on the state of other jobs. Parent jobs: Jobs that other jobs depend on. … Continue reading

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PBS Dependency Lists

from: http://beige.ucs.indiana.edu/I590/node45.html In this section we are going to do what we have done in section 4.3.4, but we will use PBS facility for defining job dependencies instead. We will have four scripts as before, but the scripts will be simpler … Continue reading

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PBS Job Chains and Dependencies

from: https://docs.loni.org/wiki/PBS_Job_Chains_and_Dependencies   Deprecated: please see new documentation site. Quite often, a single simulation requires multiple long runs which must be processed in sequence. One method for creating a sequence of batch jobs is to execute the “qsub” or “llsubmit” command to … Continue reading

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SGE Job Dependencies

From: https://wiki.duke.edu/display/SCSC/SGE+Job+Dependencies SGE can hold jobs until certain job-dependencies are met – i.e. it will not start a job until it knows that its predecessor has completed. Thus, you can submit two jobs, job1 and job2, telling SGE to hold … Continue reading

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